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max planck institut
informatik
mpii logo Minerva of the Max Planck Society

Recent Publications

Thomas Lengauer

Prof. Dr. Thomas Lengauer, Ph.D.

Max-Planck-Institut für Informatik
Computational Biology and Applied Algorithmics

Stuhlsatzenhausweg 85
66123 Saarbrücken, Germany

email: lengauer@mpi-sb.mpg.de
phone: +49 681 9325 300
fax: +49 681 9325 399
room: 501


Recent Publications

Journal Publications

M. Ralser, M. Albrecht, U. Nonhoff, T. Lengauer, H. Lehrach, S. Krobitsch
Ataxin-2 interacts with the cytoplasmatic poly(A)-binding protein 1 and is implicated in RNA-processing pathways
Journal of Molecular Biology 346, 1 (2005) 203-214

M. Albrecht, D. Choubey, T. Lengauer
The HIN domain of IFI-200 proteins consists of two OB folds
Biochemical and Biophysical Research Communications 327, 3 (2005) 679-687

S. Ulmschneider, U. Müller-Vieira, C. Klein, I. Antes, T. Lengauer, R.W. Hartmann
Synthesis and evaluation of imidalzolymethylene-tetrahydronaphtalenes and –indanes: Potent inhibitors of Aldosterone Synthase
Journal of Medicinal Chemistry 48, 6 (2005) 1796-1805

N. Beerenwinkel, J. Rahnenführer, R. Kaiser, D. Hoffmann, J. Selbig, T. Lengauer
Mtreemix: a software package for learning and using mixture models of mutagenetic trees
Bioinformatics 21, 9 (2005) 2106-2107

N. Beerenwinkel, M. Däumer, T. Sing, J. Rahnenführer, T. Lengauer, J. Selbig, D. Hoffmann, R. Kaiser
Estimating HIV evolutionary pathways and the genetic barrier to drug resistance
Journal of Infectious Diseases 191, 11 (2005) 1953-1960

J. Rahnenführer, N. Beerenwinkel, B. Wullich, W.A. Schulz, C. Hartmann, A. von Deimling, T. Lengauer
Estimating cancer survival and clinical outcome based on genetic tumor progression scores
Bioinformatics 21, 10 (2005) 2438-2446

R. Valentonyte, J. Hampe, K. Huse, P. Rosenstiel, M. Albrecht, A. Stenzel, M. Nagy, K.I. Gaede, A. Franke, R, Haeseler, A. Koch, T. Lengauer, D. Seegert, N. Reiling, S. Ehlers, E. Schweinger, M. Platzer, M. Krawczak, J. Müller-Querheim, M. Schürmann, S. Schreiber
Sarcoidosis is associated with a truncating splice site mutation in BTNL2
Nature Genetics 37, 4 (2005) 357-364

M. J. van Duist, M. Albrecht, D. Gaichino, T. Lengauer, M. De Marchi. M. Podswiadek, L. Punzi
A new CARD15 variant in Blau syndrome
European Journal of Human Genetics 13, 6 (2005) 742-747

A. Hahn, J. Rahnenführer, P. Talwar, T. Lengauer
Confirmation of human protein interaction data by human expression data
BMC Bioinformatics 6, 1 (2005) 12

N. Beerenwinkel, J. Rahnenführer, M. Däumer, D. Hoffmann, R. Kaiser, J. Selbig, T. Lengauer
Learning multiple evolutionary pathways from cross-sectional data
Journal of Computational Biology 12, 6 (2005) 584-598

C.M. Costello, N. Mah, R. Häsler, P. Rosenstiel, G.H. Waetzig, A. Hahn, T. Lu, Y. Gurbuz, S. Nikolaus, M. Albrecht, J. Hampe, R. Lucius, G. Klöppel, H. Eickhoff, H. Lehrach, T. Lengauer, S, Schreiber
Dissection of inflammatory bowel disease transcriptome using genome-wide cDNA microarrays identifies novel candidate disease genes
PLoS Medicine 2, 8 (2005) e199

T. Sing, O. Sander, N. Beerenwinkel, T. Lengauer
ROCR – Visualizing classifier performance in R
erscheint in Bioinformatics 21, 20 (2005) 3940-3941

C. Sarrazin, U. Mihm, E. Herrmann, C. Welsch, M. Albrecht, U. Sarrazin, S. Traver, T. Lengauer, S. Zeuzem
Replication enhancing mutations of the Hepatitis C virus replicon: Prevalence and clinical significance in patients with chronic Hepatitis C
Journal of Infectious Diseases 192, 10 (2005) 1710-1719

M. Albrecht, C. Huthmacher, S.C.E. Tosatto, T. Lengauer
Decomposing protein networks into domain-domain interactions, Proceedings of the Fourth European Conference on Computational Biology (ECCB 2005)
Bioinformatics 21, Suppl. 2 (2005) ii220-ii221

I. Antes, C. Merkwirth, T. Lengauer
POEM: Parameter optimization using ensemble methods: application to target specific scoring functions
Journal of Chemical Information and Modeling 45, 5 (2005) 1291-1302

N. Beerenwinkel, T. Sing, T. Lengauer, J. Rahnenführer, K. Roomp, I. Savenkov, R. Fischer, D. Hoffmann, J. Selbig, K. Korn, H. Walter, T. Berg, P. Braun, G. Fätkenheuer, M. Oette, J. Rockstroh, B. Kupfer, R. Kaiser, M. Däumer
Computational methods for the design of effective therapies against drug resistant HIV strains
Bioinformatics 21, 21 (2005)3943-3950

C. Merkwirth, T. Lengauer
Automatic Generation of complementary descriptors with molecular graph networks
Journal of Chemical Information and Modeling 45, 5 (2005) 1159-1168

S. Wemmert, R. Ketter, J. Rahnenführer, N. Beerenwinkel, M. Strowitzki, W. Feiden, C. Hartmann, T. Lengauer, F. Stockhammer, K. D. Zang, E. Meese, W.-I. Steudel, A. von Deimling, S. Urbschat
Patients with high grade gliomas harboring deletions of chromosomes 9p and 10q benefit from temozolomide treatment
Neoplasia 7, 10 (2005) 883-893

G. Hessler, M. Zimmermann, H. Matter, A. Evers, T. Naumann, T. Lengauer, M. Rarey
Multiple-Ligand-Based Virtual Screening: Methods and Applications of the MTree Approach
Journal of Medicinal Chemistry 48, 21 (2005) 6575-6584

C. Bock, S. Reither, T. Mikeska, M. Paulsen, J. Walter, T. Lengauer
BiQ Analyzer: Visulaization and quality control for DNA methylation data from bisulphite sequencing
Bioinformatics 21, 21 (2005) 4067-4068

J. Bojunga, C. Welsch, I. Antes, M. Albrecht, T. Lengauer, S. Zeuzem
Structural and functional analysis of a novel mutation of CYP21B in a heterozygote carrier of 21-hydroxylase deficiency
Human Genetics 117, 6 (2005) 558-564

M. Ralser, U. Nonhoff, M. Albrecht, T. Lengauer, E.E. Wanker, H. Lehrach, S. Krobitsch
Ataxin-2 and huntingtin interact with endophilin-A complexes to function in plastin-associated pathways
Human Molecular Genetics 14, 19 (2005) 2893-2909

S. Castellano, A.V. Lobanov, C. Chapple, S.V. Novolesov, M. Albrecht, D. Hua, A. Lescure, T. Lengauer, A. Krol, V.N. Gladyshev, R. Guigo
Diversity and functional plasticity of eukaryotic selenoproteins: identification and characterization of the novel SelJ family
Proceedings of the National Academy of Sciences 102, 45 (2005) 16188-16193

M. Albrecht, T. Lengauer
Survey on PABC recognition motif PAM2
Biochem. Biophys .Res. Comm. 316, 1 (2004) 129-138

M. Stoll, B. Corneliussen, C.M. Costello, G.H. Waetzig, B. Mellgard, W.A. Koch, P. Rosenstiel, M. Albrecht, P.J.P. Croucher, d. Seegert, s. Nikolaus, J. Hampe, T. Lengaur, S. Pierrou, U.R. Foelsch, C.G. Mathew, M. Lagerstrom-Fermer, S. Schreiber
Generic variation in DLF5 confers susceptibility to inflammatory bowel disease
Nature Genetics 36, 5 (2004) 476-480

I. Sommer, J. Rahnenführer, F.S. Domingues, U. de Lichtenberg, T. Lengauer
Predicting protein structure classes from function predictions
Bioinformatics 20, 5 (2004) 770-776

N. von Öhsen, I. Sommer, R. Zimmer, T. Lengauer
Arby: Automatic protein structure prediction using profile-profile alignment and confidence measures
Bioinformatics 20, 14 (2004) 2228-2235

M. Albrecht, M. Golatta, U. Wüllner, T. Lengauer
Structural and functional analysis of Ataxin-2 and Ataxin-3
European Journal of Biochemistry 271, 15 (2004) 3155-3170

A. Hannemann, J. C. Schön, M. Jansen, H. Putz, T. Lengauer
Modelling amorphous Si3B3N7,: Structure and elastic properties
Physical Review B 70, 14 144201 (2004)

F. Domingues, J. Rahnenführer, T. Lengauer
Automated clustering of ensembles of alternative models in protein structure databases
Protein Engineering, Design and Selection 17, 6 (2004) 537-543

C. Merkwirth, H. Mauser, T. Schulz-Gasch, O. Roche, M. Stahl, T. Lengauer
Ensemble methods for classification in cheminformatics
Journal Chemical Information and Computer Science 44,6 (2004) 1971-1978

J. Rahnenführer, F.S. Domingues, J. Maydt, T. Lengauer
Calculating the statistical significance of changes in pathway activity from gene expression data
Statistical Applications in Genetics and Molecular Biology 3, 1 (2004) Article 16.

M. Albrecht, T. Lengauer
Novel Sm-like proteins with long C-terminal tails and associated methyl tranferases
FEBS Letters 569, 1-3 (2004 18-26

W.P. Hofmann, E. Herrmann, B. Kronenberger, c. Merkwirth, C. Welsch, T. Lengauer, S. Zeuzem, C. Sarrazin
Association of HCV-related mixed cryoglobulinemia with specific mutational patterns of the HCV E2 protein and CD81 expression on peripheral B lymphocytes
Blood 104, 4 (2004) 1228-1229.

M. Albrecht, F.S. Domingues, S. Schreiber, T. Lengauer,
Structural localization of disease-associated sequence variations in the NACHT and LRR domains of PYPAF1 and NOD2
FEBS Letters 554 3 (2003) 520-528.

M. Albrecht, F.S. Domingues, S. Schreiber, T. Lengauer,
Identification of mammalian orthologs associates PYPAF5 with distinct functional roles
FEBS Letters 538 1-3 (2003) 173-177.

P. Talwar, C. Wittmann, E. Heinzle, T. Lengauer
Software tool for automated processing of 13C labeling data from mass spectrometric data
BioTechniques 35, 6 (2003)

M. Albrecht, T. Lengauer, S. Schreiber,
Disease-associated variants in PYPAF1 and NOD2 result in similar alterations of conserved sequence
FEBS Letters 538 (2003) 173-177.

N. Beerenwinkel, M. Däumer, M. Oette, K. Korn, D. Hoffmann, R. Kaiser, T. Lengauer, J. Selbig, H. Walter,
Geno2pheno: Estimating phenotypic drug resistance from HIV-1 genotypes
Nucleic Acids Res. 31, 13 (2003) 3850-3855.

A. Zien, J. Fluck, R. Zimmer. T. Lengauer,
Microrarrays: How many do you need?
Journal of Computational Biology 10, 3-4 (2003) 653-667.

M. Albrecht, D. Hoffmann, B. O. Evert, I. Schmitt, U. Wüllner, T. Lengauer,
Structural Modeling of Ataxin-3 reveals distant homology to adaptins
Proteins: Structure, Function and Genetics 50, 2 (2002) 355-370.

I. Sommer, A. Zien, N. von Öhsen, R. Zimmer, T. Lengauer,
Confidence Measures for Protein Fold Recognition
Bioinformatics 18, 6, (2002) 802-12.

S. Hindle, M. Rarey, C. Buning, T. Lengauer,
Flexible Docking Under Pharmacophore Constraint
Journal of Computer-Aided Molecular Design 16, 2, (2002), 129-149.

N. Beerenwinkel, B. Schmidt, H. Walter, R. Kaiser, T. Lengauer, D. Hoffmann, K. Korn, J. Selbig,
Diversity and complexity of HIV-1 drug resistance: A bioinformatics approach to predicting phenotype from genotype
Proceedings of the National Academy of Sciences 99, 12 (2002) 8271-8276.

D. Hanisch, R. Zimmer, T. Lengauer,
ProML - the Protein Markup Language for specification of protein sequences, structures and families,
In Silico Biology 2, 0029 (2002).

M. Albrecht, D. Hanisch, R. Zimmer, T. Lengauer,
Improving fold recognition of protein threading by experimental distance constraints,
In Silico Biology 2, 0030 (2002).

J. Freudenberg, R. Zimmer, T. Lengauer,
A hypergraph-based method for unification of existing protein structure- and sequence-families
In Silico Biology 2, 0031 (2002).

N. Beerenwinkel, B. Schmidt, H. Walter, R. Kaiser, T. Lengauer, D. Hoffmann, K. Korn, J. Selbig,
Geno2pheno: a new machine learning approach to predicting phenotypic drug resistance from genotype
Antiviral Therapy 6 (Supplement 1) (2001) 104.

N. Beerenwinkel, B. Schmidt, H. Walter, R. Kaiser, T. Lengauer, D. Hoffmann, K. Korn, J. Selbig,
Geno2pheno: A system for the interpretation of genotypic HIV drug resistance tests
IEEE Intelligent Systems 16, 6 (2001) 35-41.

M. Schäfer, T. Lengauer,
Automated Layout Generation and Wiring Area Estimation for 3D Electronic Modules
ASME Journal of Mechanical Design 123, 3 (2001) 330-336.

T. Lengauer, M. Lügering,
Provably Good Global Routing of Integrated Circuits
SIAM Journal on Optimization 11, 1 (2001), 1-30.

H. Claußen, C. Buning, M. Rarey, T. Lengauer,
FlexE: efficient molecular docking considering protein structure variations
Journal of Molecular Biology 308, 2 (2001) 377-395.

C. Lemmen, M. Zimmermann, T. Lengauer,
Molecular Superpositioning as an Effective Tool for Virtual Database Screening
Perspectives in Drug Discovery and Design 20, 1 (2000) 43-62.

A. Zien, R. Zimmer, T. Lengauer,
A Simple Iterative Approach to Parameter Optimization
Journal of Computational Biology (2000) 7, 3/4 (2000) 483-501.

R. Küffner, A. Zien, R. Zimmer, T. Lengauer,
Pathway analysis in metabolic databases via Differential Metabolic Display (DMD)
Bioinformatics 16, 9 (2000) 825-836.

A. Zien, G. Rätsch, S. Mika, T. Lengauer, K. Müller,
Engineering Support Vector Machines Kernels That Recognize Translation Initiation Sites
Bioinformatics 16, 9 (2000) 799-807.

M. Rarey, T. Lengauer,
A Recursive Algorithm for Efficient Combinatorial Library Docking
Perspectives of Drug Discovery and Design 20, 1 (2000) 63-81.

C. Lemmen, T. Lengauer,
Computational Methods for the Structural Alignment of Molecules
Journal of Computer-Aided Molecular Design 14, 3 (2000) 215-232.

J. Selbig, T. Mevissen, T. Lengauer,
Decision Tree-based Formation of Consensus Protein Secondary Structure Prediction
Bioinformatics 15, 12 (1999) 1039-1046.

B. Kramer, G. Metz, M. Rarey, T. Lengauer,
Ligand Docking and Screening With FlexX
Medical Chemistry Research 9, 7/8 (1999) 463-478.

D. Hoffmann, B. Kramer, T. Washio, T. Steinmetzer, M. Rarey, T. Lengauer,
Two-stage Method for Protein Ligand Docking
Journal of Medicinal Chemistry 42 (1999) 4422-4433.

R. Thiele, R. Zimmer, T. Lengauer,
Protein Threading by Recursive Dynamic Programming
Journal of Molecular Biology 290 (1999) 757-779.

D. Hofmann, T. Lengauer,
Prediction of Crystal Structures of Organic Molecules
Journal of Molecular Structure 474 (1999) 13-23.

B. Kramer, M. Rarey, T. Lengauer,
Evaluation of the FlexX Incremental Construction Algorithm for Protein-Ligand Docking
PROTEINS: Structure, Function and Genetics 37 (1999) 228-241.

M. Rarey, B. Kramer, T. Lengauer,
Docking of Hydrophobic Ligands With Interaction-based Matching Algorithms
Bioinformatics 15, 3 (1999) 243-250.

M. Rarey, B. Kramer, T. Lengauer,
The Particle Concept: Placing Discrete Water Molecules During Protein-Ligand Docking Predictions
PROTEINS: Structure, Functions and Genetics 34 (1999) 17-28.

C. Lemmen, T. Lengauer, G. Klebe,
FlexS: A Method for Fast Flexible Ligand Superposition
Journal of Medicinal Chemistry 41,23 (1998) 4502-4520.

C. Lemmen, C. Hiller, T. Lengauer,
RigFit: A New Approach to Superimposing Ligand Molecules
Journal of Computer-Aided Molecular Design 12,5 (1998) 491-502.

R. Heckmann, T. Lengauer,
Computing Upper and Lower Bounds on Textile Nesting Problems
European Journal of Operational Research 108,3 (1998) 473-489.

D. Hofmann, T. Lengauer,
Crystal Structure Prediction based on Statistical Potentials
Journal of Molecular Modeling 4 (1998) 132-144.

D. Hofmann, T. Lengauer,
A Discrete Algorithm for Crystal Structure Prediction of Organic Molecules
Acta Crystallographica A53 (1997) 225-235.

C. Lemmen, T. Lengauer,
Time-Efficient Flexible Superposition of Medium-Sized Molecules
Journal of Computer-Aided Molecular Design 11,4 (1997) 357-368.

M. Rarey, B. Kramer, T. Lengauer,
Multiple Automatic Base Selection: Protein-Ligand Docking Based on Incremental Construction without Manual Intervention
Journal of Computer-Aided Molecular Design 11,4 (1997) 369-384.

B. Kramer, M. Rarey, T. Lengauer,
CASP-2 Experiences With Docking Flexible Ligands Using FlexX
PROTEINS: Structure, Function, and Genetics, Suppl. 1 (1997) 221-225.


Invited papers

F. S. Domingues, T. Lengauer,
Finding Protein Function from Sequence and Structure Data
Applied Bioinformatics 2,1 (2003) 3-12.

T. Lengauer, M. Schäfer,
Combinatorial Optimization Techniques for Three-Dimensional Arrangement Problems, in Mathematics - Key Technology for the Future
(W. Jäger, H.-J. Krebs, eds.), Springer Verlag, Heidelberg (2003) 63-73.

T. Lengauer,
Computational Biology at the Beginning of the Postgenomic Era
Symposium "Dagstuhl, 10 Years", R. Wilhelm, ed., Springer Lecture Notes in Computer Science No.2000 (2000)

T. Lengauer, R. Zimmer,
Structure Prediction Methods for Drug Design
Briefings in Bioinformatics 1,3 (2000) 275-288.

T. Lengauer,
Computational Biology - Algorithms and More
Proceedings of the Eighth European Symposium on Algorithms (ESA 2000), M. Paterson, ed., Springer Lecture Notes in Computer Science No.1879 (2000) 9-19.

T. Lengauer,
The Flex Approach - An Alternative for Receptor-Ligand Docking and Computing Crystal Conformations
Chapter 25 of Computer-Assisted Lead Finding and Optimization - Current Tools for Medicinal Chemistry (H. van de Waterbeemd, B. Testa, G. Folkers, Hrsg.), Verlag Helvetica Acta, Basel, Switzerland(1997) 399-420.

T. Lengauer,
Molekulare Bioinformatik: Eine interdisziplinäre Herausforderung
In: Highlights der Informatik (I. Wegener Hrsg.), Springer Verlag, Heidelberg (1996).

T. Lengauer, M. Rarey,
Methods for Predicting Molecular Complexes Involving Proteins
Current Opinion in Structural Biology 5 (1996).


Articles in refereed conference proceedings that have not appeared in journals

N. Beerenwinkel, J. Rahnenführer, M. Däumer, D. Hoffmann, R. Kaiser, J. Selbig, T. Lengauer
Learning multiple evolutionary pathways from cross-sectional data
Proceeding of the Eighth Annual Conference on Computational Biology (RECOMB 2004) (2004) 36-44.

N. Beerenwinkel, T. Lengauer, M. Däumer, R. Kaiser, H. Walter, K. Korn, D. Hoffmann, J. Selbig,
Methods for optimizing antiviral combination therapies
to appear in Proceedings of the Eleventh International Conference on Intelligent Systems for Molecular Biology (ISMB2003) (2003), in Bioinformatics 19, Suppl. 1 (2003) i16-i25.

D. Hanisch, A. Zien, R. Zimmer, T. Lengauer,
Co-clustering of biological networks and gene expression data
Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology (ISMB2002) (2002).

N. Beerenwinkel, B. Schmidt, H. Walter, R. Kaiser, T. Lengauer, D. HOffmann, K. Korn, J. Selbig
Identifying drug resistance-associated patterns in HIV genotypes
Proceedings of the German Conference on Bioinformatics (2001) 126-130.

H. Claußen, C. Buning, M. Rarey, T. Lengauer,
Molecular Docking into the Flexible Active Site of Aldose Reductase Using FlexE
Rational Approaches to Drug Design: Proceedings of 13th European Symposium on Quantitative Structure-Activity Relationships, Prous Science, Barcelona (2001) 324-333.

J. Apostolakis, D. Hofmann, T. Lengauer,
Using simple learning machines to derive a new potential for modeling
Rational Approaches to Drug Design: Proceedings of 13th European Symposium on Quantitative Structure-Activity Relationships, Prous Science, Barcelona (2001) 125-134.

A. Zien, T. Aigner, R. Zimmer, T. Lengauer,
Centralization: A biologically sensible method for the normalization of gene expression data
Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology (ISMB2001), Bioinformatics, Vol. 17 Suppl. 1 (2001) 323-331.

A. Zien, R. Küffner, R. Zimmer., T. Lengauer,
Analysis of Gene Expression Data With Pathway Scores
Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology (ISMB2000), AAAI Press (2000) 407-417.

C. Lemmen, A. Zien, R. Zimmer, T. Lengauer,
Application of Parameter Optimization to Molecular Comparison Problems
Pacific Symposium on Biocomputing (PSB’99), World Scientific, New Jersey (1999) 482-493.

C. Lemmen, T. Lengauer,
Fragment-based Screening of Ligand Databases
Proceedings of EURO-QSAR’98 (1998).

M. Peinado, T. Lengauer,
Random generation of Embedded Graphs and an Extension to Dobrushin Uniqueness
Proceedings of the Thirtieth Annual ACM Symposium on Theory of Computing, ACM Press (1998) 176-185.

M. Peinado, T. Lengauer,
'Go with the Winners': Generators with Applications to Molecular Modeling
Proceedings of the 1st International Workshop on Randomization and Approximation Techniques in Computer Science (Random’97) (J. Rolim, ed.), Springer Lecture Notes in Computer Science No. 1269 (1997) 135-149.

M. Peinado, T. Lengauer,
'Go with the Winners': Generators with Applications to Molecular Modeling
Proceedings of Random'97, Springer Lecture Notes in Computer Science (1997).

M. Peinado T. Lengauer,
Parallel 'Go With the Winners' Algorithms in the LogP Model
Proceedings of the 11th International ParallelProcessing Symposium, IEEE Computer Society Press, Los Alamitos, California (1997), 656-664.

I. Koch, T. Lengauer,
Detection of Distant Structural Similarities in a Set of Proteins Using an Efficient Graph-Based Algorithm
Fifth International Symposium on Intelligent Systems for Molecular Biology, AAAI Press (1997).

R. Zimmer, T. Lengauer,
Fast and Numerically Stable Parametric Alignment of Biosequences
Proceedings of the First Annual Conference on Research in Computational Molecular Biology (RECOMB'97) (1997), 344-353.

M. Rarey, B. Kramer, C. Bernd, T. Lengauer
Time-efficient docking of similar flexible ligands
Biocomputing: Proceedings of the 1996 Pacific Symposium (L. Hunter, T. Klein, eds.), World-Scientific Puclishing Co. Singapore (1996).

E. Frank, T. Lengauer
APPlaUSE: Area and Performance Optimization in a unified Placement and systhesis environment
Proceedings of the International Conference on Computer-Aided Design (ICCAD) (1995) 662-667

H. Schmidt, D. Theune, R. Thiele, T. Lengauer
EMC-driven midway routing on PCBs.
Proceedings of the European Design and Test Conference (EDAC-ETC'95) (1995) 486-491.

M. Rarey, B. Kramer, T. Lengauer
Time-efficient docking of flexible ligands into active sites of proteins
Third International Symposium on Intelligent Systems for Molecular Biology (c. Rawlings et al., eds.), AAAI Press, Menlo Park, CA (1995) 300-308.

R. Thiele, R. Zimmer, T. Lengauer
Recursive dynamic programming for adaptive sequence and structure alignment
Third International Symposium on Intelligent Systems for Moledular Biology (C. Rawlings et al., eds.), AAAI Press, Menlo Park, CA (1995) 384-392. (