Current Year
1. Bastys T, Gapsys V, Walter H, Heger E, Doncheva NT, Kaiser R, de Groot BL, Kalinina OV: Non-active Site Mutants of HIV-1 Protease Influence Resistance and Sensitisation towards Protease Inhibitors. Retrovirology 2020.
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@article{Bastys2020,
TITLE = {Non-active site mutants of {HIV-1} protease influence resistance and sensitisation towards protease inhibitors},
AUTHOR = {Bastys, Tomas and Gapsys, Vytautas and Walter, Hauke and Heger, Eva and Doncheva, Nadezhda Tsankova and Kaiser, Rolf and de Groot, Bert L. and Kalinina, Olga V.},
LANGUAGE = {eng},
ISSN = {1742-4690},
DOI = {10.1186/s12977-020-00520-6},
PUBLISHER = {BioMed Central},
ADDRESS = {London},
YEAR = {2020},
JOURNAL = {Retrovirology},
EID = {13},
}
Endnote
%0 Journal Article
%A Bastys, Tomas
%A Gapsys, Vytautas
%A Walter, Hauke
%A Heger, Eva
%A Doncheva, Nadezhda Tsankova
%A Kaiser, Rolf
%A de Groot, Bert L.
%A Kalinina, Olga V.
%+ Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
External Organizations
External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
%T Non-active Site Mutants of HIV-1 Protease Influence Resistance and Sensitisation towards Protease Inhibitors :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-A274-0
%R 10.1186/s12977-020-00520-6
%2 PMC7236880
%7 2020
%D 2020
%J Retrovirology
%Z sequence number: 13
%I BioMed Central
%C London
%@ false
2. Baumgarten N, Schmidt F, Schulz MH: Improved Linking of Motifs to their TFs Using Domain Information. Bioinformatics 2020, 36.
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@article{Baumgarten2020,
TITLE = {Improved linking of motifs to their {TFs} using domain information},
AUTHOR = {Baumgarten, Nina and Schmidt, Florian and Schulz, Marcel Holger},
LANGUAGE = {eng},
ISSN = {1367-4803},
DOI = {10.1093/bioinformatics/btz855},
PUBLISHER = {Oxford University Press},
ADDRESS = {Oxford},
YEAR = {2020},
DATE = {2020},
JOURNAL = {Bioinformatics},
VOLUME = {36},
NUMBER = {6},
PAGES = {1655--1662},
}
Endnote
%0 Journal Article
%A Baumgarten, Nina
%A Schmidt, Florian
%A Schulz, Marcel Holger
%+ External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
%T Improved Linking of Motifs to their TFs Using Domain Information :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-A2A9-4
%R 10.1093/bioinformatics/btz855
%7 2019
%D 2020
%J Bioinformatics
%V 36
%N 6
%& 1655
%P 1655 - 1662
%I Oxford University Press
%C Oxford
%@ false
3. Berzow D, Descamps D, Obermeier M, Charpentier C, Kaiser R, Guertler L, Eberle J, Wensing A, Sierra S, Ruelle J, Gomes P, Mansinho K, Taylor N, Jensen B, Döring M, Stürmer M, Rockstroh J, Camacho R: HIV-2: A Summary of Present Standard of Care and Treatment Options for HIV-2 Infected Individuals Living in Western Europe. Clinical Infectious Diseases 2020.
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BibTeX
@article{Berzow2020,
TITLE = {{HIV}-2: {A} summary of present standard of care and treatment options for {HIV}-2 infected individuals living in {Western Europe}},
AUTHOR = {Berzow, Dirk and Descamps, Diane and Obermeier, Martin and Charpentier, Charlotte and Kaiser, Rolf and Guertler, Lutz and Eberle, Josef and Wensing, Annemarie and Sierra, Saleta and Ruelle, Jean and Gomes, Perpetua and Mansinho, Kamal and Taylor, Ninon and Jensen, Bj{\"o}rn and D{\"o}ring, Matthias and St{\"u}rmer, Martin and Rockstroh, J{\"u}rgen and Camacho, Ricardo},
LANGUAGE = {eng},
ISSN = {1058-4838},
DOI = {10.1093/cid/ciaa275},
PUBLISHER = {The University of Chicago Press},
ADDRESS = {Chicago, IL},
YEAR = {2020},
JOURNAL = {Clinical Infectious Diseases},
EID = {ciaa275},
}
Endnote
%0 Journal Article
%A Berzow, Dirk
%A Descamps, Diane
%A Obermeier, Martin
%A Charpentier, Charlotte
%A Kaiser, Rolf
%A Guertler, Lutz
%A Eberle, Josef
%A Wensing, Annemarie
%A Sierra, Saleta
%A Ruelle, Jean
%A Gomes, Perpetua
%A Mansinho, Kamal
%A Taylor, Ninon
%A Jensen, Björn
%A Döring, Matthias
%A Stürmer, Martin
%A Rockstroh, Jürgen
%A Camacho, Ricardo
%+ External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
External Organizations
External Organizations
%T HIV-2: A Summary of Present Standard of Care and Treatment Options for HIV-2 Infected Individuals Living in Western Europe :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-5A74-3
%R 10.1093/cid/ciaa275
%7 2020
%D 2020
%J Clinical Infectious Diseases
%Z sequence number: ciaa275
%I The University of Chicago Press
%C Chicago, IL
%@ false
4. Chakraborty S, Canzar S, Marschall T, Schulz MH: Chromatyping: Reconstructing Nucleosome Profiles from NOMe Sequencing Data. Journal of Computational Biology 2020, 27.
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@article{Chakraborty_2020,
TITLE = {Chromatyping: {R}econstructing Nucleosome Profiles from {NOMe} Sequencing Data},
AUTHOR = {Chakraborty, Shounak and Canzar, Stefan and Marschall, Tobias and Schulz, Marcel H.},
LANGUAGE = {eng},
ISSN = {1066-5277},
DOI = {10.1089/cmb.2019.0457},
PUBLISHER = {Mary Ann Liebert},
ADDRESS = {New York, NY},
YEAR = {2020},
DATE = {2020},
JOURNAL = {Journal of Computational Biology},
VOLUME = {27},
NUMBER = {3},
PAGES = {330--341},
}
Endnote
%0 Journal Article
%A Chakraborty, Shounak
%A Canzar, Stefan
%A Marschall, Tobias
%A Schulz, Marcel H.
%+ External Organizations
External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
%T Chromatyping: Reconstructing Nucleosome Profiles from NOMe Sequencing Data :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-97D4-0
%R 10.1089/cmb.2019.0457
%7 2020
%D 2020
%J Journal of Computational Biology
%V 27
%N 3
%& 330
%P 330 - 341
%I Mary Ann Liebert
%C New York, NY
%@ false
5. Chin C-S, Wagner J, Zeng Q, Garrison E, Garg S, Fungtammasan A, Rautiainen M, Aganezov S, Kirsche M, Zarate S, Schatz MC, Xiao C, Rowell WJ, Markello C, Farek J, Sedlazeck FJ, Bansal V, Yoo B, Miller N, Zhou X, Carroll A, Barrio AM, Salit M, Marschall T, Dilthey AT, Zook JM: A Diploid Assembly-based Benchmark for Variants in the Major Histocompatibility Complex. Nature Communications 2020, 11.
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BibTeX
@article{Chin2020,
TITLE = {A Diploid Assembly-based Benchmark for Variants in the Major Histocompatibility Complex},
AUTHOR = {Chin, Chen-Shan and Wagner, Justin and Zeng, Qiandong and Garrison, Erik and Garg, Shilpa and Fungtammasan, Arkarachai and Rautiainen, Mikko and Aganezov, Sergey and Kirsche, Melanie and Zarate, Samantha and Schatz, Michael C. and Xiao, Chunlin and Rowell, William J. and Markello, Charles and Farek, Jesse and Sedlazeck, Fritz J. and Bansal, Vikas and Yoo, Byunggil and Miller, Neil and Zhou, Xin and Carroll, Andrew and Barrio, Alvaro Martinez and Salit, Marc and Marschall, Tobias and Dilthey, Alexander T. and Zook, Justin M.},
LANGUAGE = {eng},
ISSN = {2041-1723},
DOI = {10.1038/s41467-020-18564-9},
PUBLISHER = {Nature Publishing Group},
ADDRESS = {London},
YEAR = {2020},
DATE = {2020},
JOURNAL = {Nature Communications},
VOLUME = {11},
NUMBER = {1},
EID = {4794},
}
Endnote
%0 Journal Article
%A Chin, Chen-Shan
%A Wagner, Justin
%A Zeng, Qiandong
%A Garrison, Erik
%A Garg, Shilpa
%A Fungtammasan, Arkarachai
%A Rautiainen, Mikko
%A Aganezov, Sergey
%A Kirsche, Melanie
%A Zarate, Samantha
%A Schatz, Michael C.
%A Xiao, Chunlin
%A Rowell, William J.
%A Markello, Charles
%A Farek, Jesse
%A Sedlazeck, Fritz J.
%A Bansal, Vikas
%A Yoo, Byunggil
%A Miller, Neil
%A Zhou, Xin
%A Carroll, Andrew
%A Barrio, Alvaro Martinez
%A Salit, Marc
%A Marschall, Tobias
%A Dilthey, Alexander T.
%A Zook, Justin M.
%+ External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
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%T A Diploid Assembly-based Benchmark for Variants in the Major Histocompatibility Complex :
%G eng
%U http://hdl.handle.net/21.11116/0000-0007-360E-E
%R 10.1038/s41467-020-18564-9
%7 2020
%D 2020
%J Nature Communications
%O Nat. Commun.
%V 11
%N 1
%Z sequence number: 4794
%I Nature Publishing Group
%C London
%@ false
6. Delacher M, Imbusch CD, Hotz-Wagenblatt A, Mallm J-P, Bauer K, Simon M, Riegel D, Rendeiro AF, Bittner S, Sanderink L, Pant A, Schmidleithner L, Braband KL, Echtenachter B, Fischer A, Giunchiglia V, Hoffmann P, Edinger M, Bock C, Rehli M, Brors B, Schmidl C, Feuerer M: Precursors for Nonlymphoid-Tissue Treg Cells Reside in Secondary Lymphoid Organs and Are Programmed by the Transcription Factor BATF. Immunity 2020, 52.
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BibTeX
@article{Delacher2020,
TITLE = {Precursors for Nonlymphoid-Tissue Treg Cells Reside in Secondary Lymphoid Organs and Are Programmed by the Transcription Factor {BATF}},
AUTHOR = {Delacher, Michael and Imbusch, Charles D. and Hotz-Wagenblatt, Agnes and Mallm, Jan-Philipp and Bauer, Katharina and Simon, Malte and Riegel, Dania and Rendeiro, Andr{\'e} F. and Bittner, Sebastian and Sanderink, Lieke and Pant, Asmita and Schmidleithner, Lisa and Braband, Kathrin L. and Echtenachter, Bernd and Fischer, Alexander and Giunchiglia, Valentina and Hoffmann, Petra and Edinger, Matthias and Bock, Christoph and Rehli, Michael and Brors, Benedikt and Schmidl, Christian and Feuerer, Markus},
LANGUAGE = {eng},
ISSN = {1074-7613},
DOI = {10.1016/j.immuni.2019.12.002},
PUBLISHER = {Cell Press},
ADDRESS = {Cambridge, Mass.},
YEAR = {2020},
JOURNAL = {Immunity},
VOLUME = {52},
NUMBER = {2},
PAGES = {295--312},
EID = {e11},
}
Endnote
%0 Journal Article
%A Delacher, Michael
%A Imbusch, Charles D.
%A Hotz-Wagenblatt, Agnes
%A Mallm, Jan-Philipp
%A Bauer, Katharina
%A Simon, Malte
%A Riegel, Dania
%A Rendeiro, André F.
%A Bittner, Sebastian
%A Sanderink, Lieke
%A Pant, Asmita
%A Schmidleithner, Lisa
%A Braband, Kathrin L.
%A Echtenachter, Bernd
%A Fischer, Alexander
%A Giunchiglia, Valentina
%A Hoffmann, Petra
%A Edinger, Matthias
%A Bock, Christoph
%A Rehli, Michael
%A Brors, Benedikt
%A Schmidl, Christian
%A Feuerer, Markus
%+ External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
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External Organizations
External Organizations
External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
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External Organizations
External Organizations
%T Precursors for Nonlymphoid-Tissue Treg Cells Reside in Secondary Lymphoid Organs and Are Programmed by the Transcription Factor BATF :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-8E56-A
%R 10.1016/j.immuni.2019.12.002
%2 PMC7026712
%7 2020
%D 2020
%J Immunity
%V 52
%N 2
%& 295
%P 295 - 312
%Z sequence number: e11
%I Cell Press
%C Cambridge, Mass.
%@ false
7. Gier S, Simon M, Gasparoni G, Khalifa S, Schulz MH, Schmitt MJ, Breinig F: Yeast Viral Killer Toxin K1 Induces Specific Host Cell Adaptions via Intrinsic Selection Pressure. Applied and Environmental Microbiology 2020, 86.
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BibTeX
@article{Gier2020,
TITLE = {Yeast Viral Killer Toxin {K1} Induces Specific Host Cell Adaptions via Intrinsic Selection Pressure},
AUTHOR = {Gier, Stefanie and Simon, Martin and Gasparoni, Gilles and Khalifa, Salem and Schulz, Marcel Holger and Schmitt, Manfred J. and Breinig, Frank},
LANGUAGE = {eng},
ISSN = {0099-2240},
DOI = {10.1128/AEM.02446-19},
PUBLISHER = {American Society for Microbiology (ASM)},
YEAR = {2020},
JOURNAL = {Applied and Environmental Microbiology},
VOLUME = {86},
NUMBER = {4},
EID = {e02446-19},
}
Endnote
%0 Journal Article
%A Gier, Stefanie
%A Simon, Martin
%A Gasparoni, Gilles
%A Khalifa, Salem
%A Schulz, Marcel Holger
%A Schmitt, Manfred J.
%A Breinig, Frank
%+ External Organizations
External Organizations
External Organizations
External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
External Organizations
%T Yeast Viral Killer Toxin K1 Induces Specific Host Cell Adaptions via Intrinsic Selection Pressure :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-9771-0
%R 10.1128/AEM.02446-19
%7 2020
%D 2020
%J Applied and Environmental Microbiology
%O Appl. Environ. Microbiol.
%V 86
%N 4
%Z sequence number: e02446-19
%I American Society for Microbiology (ASM)
%@ false
8. Karunanithi S, Oruganti V, de Wijn R, Drews F, Cheaib M, Nordström K, Simon M, Schulz MH: Feeding Exogenous dsRNA Interferes with Endogenous sRNA Accumulation in Paramecium. DNA Research 2020, 27.
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BibTeX
@article{Karunanithi2020,
TITLE = {Feeding exogenous {dsRNA} interferes with endogenous {sRNA} accumulation in {Paramecium}},
AUTHOR = {Karunanithi, Sivarajan and Oruganti, Vidya and de Wijn, Raphael and Drews, Franziska and Cheaib, Miriam and Nordstr{\"o}m, Karl and Simon, Martin and Schulz, Marcel Holger},
LANGUAGE = {eng},
DOI = {10.1093/dnares/dsaa005},
PUBLISHER = {Oxford University Press},
ADDRESS = {Oxford, UK},
YEAR = {2020},
JOURNAL = {DNA Research},
VOLUME = {27},
NUMBER = {1},
EID = {dsaa005},
}
Endnote
%0 Journal Article
%A Karunanithi, Sivarajan
%A Oruganti, Vidya
%A de Wijn, Raphael
%A Drews, Franziska
%A Cheaib, Miriam
%A Nordström, Karl
%A Simon, Martin
%A Schulz, Marcel Holger
%+ Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
External Organizations
External Organizations
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External Organizations
External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
%T Feeding Exogenous dsRNA Interferes with Endogenous sRNA Accumulation in Paramecium :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-D2FC-1
%R 10.1093/dnares/dsaa005
%2 PMC7315353
%7 2020
%D 2020
%J DNA Research
%V 27
%N 1
%Z sequence number: dsaa005
%I Oxford University Press
%C Oxford, UK
9. Kreer C, Döring M, Lehnen N, Ercanoglu MS, Gieselmann L, Luca D, Jain K, Schommers P, Pfeifer N, Klein F: openPrimeR for Multiplex Amplification of Highly Diverse Templates. Journal of Immunological Methods 2020, 420.
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BibTeX
@article{Kreer2020,
TITLE = {{openPrimeR} for multiplex amplification of highly diverse templates},
AUTHOR = {Kreer, Christoph and D{\"o}ring, Matthias and Lehnen, Nathalie and Ercanoglu, Meryem S. and Gieselmann, Lutz and Luca, Domnica and Jain, Kanika and Schommers, Philipp and Pfeifer, Nico and Klein, Florian},
LANGUAGE = {eng},
ISSN = {0022-1759},
DOI = {10.1016/j.jim.2020.112752},
PUBLISHER = {Elsevier},
ADDRESS = {Amsterdam},
YEAR = {2020},
DATE = {2020},
JOURNAL = {Journal of Immunological Methods},
VOLUME = {420},
EID = {112752},
}
Endnote
%0 Journal Article
%A Kreer, Christoph
%A Döring, Matthias
%A Lehnen, Nathalie
%A Ercanoglu, Meryem S.
%A Gieselmann, Lutz
%A Luca, Domnica
%A Jain, Kanika
%A Schommers, Philipp
%A Pfeifer, Nico
%A Klein, Florian
%+ External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
%T openPrimeR for Multiplex Amplification of Highly Diverse Templates :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-5A7E-9
%R 10.1016/j.jim.2020.112752
%7 2020
%D 2020
%J Journal of Immunological Methods
%V 420
%Z sequence number: 112752
%I Elsevier
%C Amsterdam
%@ false
10. Lähnemann D, Köster J, Szczurek E, McCarthy DJ, Hicks SC, Robinson MD, Vallejos CA, Campbell KR, Beerenwinkel N, Mahfouz A, Pinello L, Skums P, Stamatakis A, Attolini CS-O, Aparicio S, Baaijens J, Balvert M, de Barbanson B, Cappuccio A, Corleone G, Dutilh BE, Florescu M, Guryev V, Holmer R, Jahn K, Lobo TJ, Keizer EM, Khatri I, Kielbasa SM, Korbel JO, et al.: Eleven Grand Challenges in Single-Cell Data Science. Genome Biology 2020, 21.
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BibTeX
@article{Laehnemann2020,
TITLE = {Eleven Grand Challenges in Single-Cell Data Science},
AUTHOR = {L{\"a}hnemann, David and K{\"o}ster, Johannes and Szczurek, Ewa and McCarthy, Davis J. and Hicks, Stephanie C. and Robinson, Mark D. and Vallejos, Catalina A. and Campbell, Kieran R. and Beerenwinkel, Niko and Mahfouz, Ahmed and Pinello, Luca and Skums, Pavel and Stamatakis, Alexandros and Attolini, Camille Stephan-Otto and Aparicio, Samuel and Baaijens, Jasmijn and Balvert, Marleen and de Barbanson, Buys and Cappuccio, Antonio and Corleone, Giacomo and Dutilh, Bas E. and Florescu, Maria and Guryev, Victor and Holmer, Rens and Jahn, Katharina and Lobo, Thamar Jessurun and Keizer, Emma M. and Khatri, Indu and Kielbasa, Szymon M. and Korbel, Jan O. and Kozlov, Alexey M. and Kuo, Tzu-Hao and Lelieveldt, Boudewijn P. F. and Mandoiu, Ion I. and Marioni, John C. and Marschall, Tobias and Moelder, Felix and Niknejad, Amir and Raczkowski, Lukasz and Reinders, Marcel and de Ridder, Jeroen and Saliba, Antoine-Emmanuel and Somarakis, Antonios and Stegle, Oliver and Theis, Fabian J. and Yang, Huan and Zelikovsky, Alex and MacHardy, Alice C. and Raphael, Benjamin J. and Shah, Sohrab P. and Sch{\"o}nhuth, Alexander},
LANGUAGE = {eng},
ISSN = {1465-6906},
DOI = {10.1186/s13059-020-1926-6},
PUBLISHER = {BioMed Central Ltd.},
ADDRESS = {London},
YEAR = {2020},
JOURNAL = {Genome Biology},
VOLUME = {21},
NUMBER = {1},
EID = {31},
}
Endnote
%0 Journal Article
%A Lähnemann, David
%A Köster, Johannes
%A Szczurek, Ewa
%A McCarthy, Davis J.
%A Hicks, Stephanie C.
%A Robinson, Mark D.
%A Vallejos, Catalina A.
%A Campbell, Kieran R.
%A Beerenwinkel, Niko
%A Mahfouz, Ahmed
%A Pinello, Luca
%A Skums, Pavel
%A Stamatakis, Alexandros
%A Attolini, Camille Stephan-Otto
%A Aparicio, Samuel
%A Baaijens, Jasmijn
%A Balvert, Marleen
%A de Barbanson, Buys
%A Cappuccio, Antonio
%A Corleone, Giacomo
%A Dutilh, Bas E.
%A Florescu, Maria
%A Guryev, Victor
%A Holmer, Rens
%A Jahn, Katharina
%A Lobo, Thamar Jessurun
%A Keizer, Emma M.
%A Khatri, Indu
%A Kielbasa, Szymon M.
%A Korbel, Jan O.
%A Kozlov, Alexey M.
%A Kuo, Tzu-Hao
%A Lelieveldt, Boudewijn P. F.
%A Mandoiu, Ion I.
%A Marioni, John C.
%A Marschall, Tobias
%A Moelder, Felix
%A Niknejad, Amir
%A Raczkowski, Lukasz
%A Reinders, Marcel
%A de Ridder, Jeroen
%A Saliba, Antoine-Emmanuel
%A Somarakis, Antonios
%A Stegle, Oliver
%A Theis, Fabian J.
%A Yang, Huan
%A Zelikovsky, Alex
%A MacHardy, Alice C.
%A Raphael, Benjamin J.
%A Shah, Sohrab P.
%A Schönhuth, Alexander
%+ External Organizations
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Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
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%T Eleven Grand Challenges in Single-Cell Data Science :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-8E39-B
%R 10.1186/s13059-020-1926-6
%7 2020
%D 2020
%J Genome Biology
%V 21
%N 1
%Z sequence number: 31
%I BioMed Central Ltd.
%C London
%@ false
11. Lengauer T: Statistical Data Analysis in the Era of Big Data. Chemie-Ingenieur-Technik 2020.
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BibTeX
@article{LengauerStatData2020,
TITLE = {Statistical Data Analysis in the Era of Big Data},
AUTHOR = {Lengauer, Thomas},
LANGUAGE = {eng},
ISSN = {0009-286X},
DOI = {10.1002/cite.202000024},
PUBLISHER = {Wiley-VCH},
ADDRESS = {Weinheim, Germany},
YEAR = {2020},
JOURNAL = {Chemie-Ingenieur-Technik},
}
Endnote
%0 Journal Article
%A Lengauer, Thomas
%+ Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
%T Statistical Data Analysis in the Era of Big Data :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-9A1B-F
%R 10.1002/cite.202000024
%7 2020
%D 2020
%J Chemie-Ingenieur-Technik
%O Chem. Ing. Tech.
%I Wiley-VCH
%C Weinheim, Germany
%@ false
12. Porubsky D, Sanders AD, Höps W, Hsieh P, Sulovari A, Li R, Mercuri L, Sorensen M, Murali SC, Gordon D, Cantsilieris S, Pollen AA, Ventura M, Antonacci F, Marschall T, Korbel JO, Eichler EE: Recurrent Inversion Toggling and Great Ape Genome Evolution. Nature Genetics 2020, 52.
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BibTeX
@article{Porubsky2020,
TITLE = {Recurrent Inversion Toggling and Great Ape Genome Evolution},
AUTHOR = {Porubsky, David and Sanders, Ashley D. and H{\"o}ps, Wolfram and Hsieh, PingHsun and Sulovari, Arvis and Li, Ruiyang and Mercuri, Ludovica and Sorensen, Melanie and Murali, Shwetha C. and Gordon, David and Cantsilieris, Stuart and Pollen, Alex A. and Ventura, Mario and Antonacci, Francesca and Marschall, Tobias and Korbel, Jan O. and Eichler, Evan E.},
LANGUAGE = {eng},
ISSN = {1061-4036},
DOI = {10.1038/s41588-020-0646-x},
PUBLISHER = {Nature America, Inc.},
ADDRESS = {New York, NY},
YEAR = {2020},
DATE = {2020},
JOURNAL = {Nature Genetics},
VOLUME = {52},
NUMBER = {8},
PAGES = {849--852},
}
Endnote
%0 Journal Article
%A Porubsky, David
%A Sanders, Ashley D.
%A Höps, Wolfram
%A Hsieh, PingHsun
%A Sulovari, Arvis
%A Li, Ruiyang
%A Mercuri, Ludovica
%A Sorensen, Melanie
%A Murali, Shwetha C.
%A Gordon, David
%A Cantsilieris, Stuart
%A Pollen, Alex A.
%A Ventura, Mario
%A Antonacci, Francesca
%A Marschall, Tobias
%A Korbel, Jan O.
%A Eichler, Evan E.
%+ Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
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%T Recurrent Inversion Toggling and Great Ape Genome Evolution :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-A2BE-D
%R 10.1038/s41588-020-0646-x
%7 2020
%D 2020
%J Nature Genetics
%O Nature Genet.
%V 52
%N 8
%& 849
%P 849 - 852
%I Nature America, Inc.
%C New York, NY
%@ false
13. Rautiainen M, Marschall T: GraphAligner: Rapid and Versatile Sequence-to-Graphalignment. Genome Biology 2020, 21.
Export
BibTeX
@article{Rautiainen2020,
TITLE = {{GraphAligner}: {R}apid and Versatile Sequence-to-Graphalignment},
AUTHOR = {Rautiainen, Mikko and Marschall, Tobias},
LANGUAGE = {eng},
ISSN = {1465-6906},
DOI = {10.1186/s13059-020-02157-2},
PUBLISHER = {BioMed Central Ltd.},
ADDRESS = {London},
YEAR = {2020},
JOURNAL = {Genome Biology},
VOLUME = {21},
NUMBER = {1},
EID = {253},
}
Endnote
%0 Journal Article
%A Rautiainen, Mikko
%A Marschall, Tobias
%+ Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
%T GraphAligner: Rapid and Versatile Sequence-to-Graphalignment :
%G eng
%U http://hdl.handle.net/21.11116/0000-0007-48FA-F
%R 10.1186/s13059-020-02157-2
%7 2020
%D 2020
%J Genome Biology
%V 21
%N 1
%Z sequence number: 253
%I BioMed Central Ltd.
%C London
%@ false
14. Rosser EC, Piper CJM, Matei DE, Blair PA, Rendeiro AF, Orford M, Alber DG, Krausgruber T, Catalan D, Klein N, Manson JJ, Drozdov I, Bock C, Wedderburn LR, Eaton S, Mauri C: Microbiota-Derived Metabolites Suppress Arthritis by Amplifying Aryl-Hydrocarbon Receptor Activation in Regulatory B Cells. Cell Metabolism 2020, 31.
Export
BibTeX
@article{Rosser2020,
TITLE = {Microbiota-Derived Metabolites Suppress Arthritis by Amplifying Aryl-Hydrocarbon Receptor Activation in Regulatory {B} Cells},
AUTHOR = {Rosser, Elizabeth C. and Piper, Christopher J. M. and Matei, Diana E. and Blair, Paul A. and Rendeiro, Andr{\'e} F. and Orford, Michael and Alber, Dagmar G. and Krausgruber, Thomas and Catalan, Diego and Klein, Nigel and Manson, Jessica J. and Drozdov, Ignat and Bock, Christoph and Wedderburn, Lucy R. and Eaton, Simon and Mauri, Claudia},
LANGUAGE = {eng},
ISSN = {1550-4131},
DOI = {10.1016/j.cmet.2020.03.003},
PUBLISHER = {Cell Press},
ADDRESS = {Cambridge, MA},
YEAR = {2020},
DATE = {2020},
JOURNAL = {Cell Metabolism},
VOLUME = {31},
NUMBER = {4},
PAGES = {837--851},
EID = {e10},
}
Endnote
%0 Journal Article
%A Rosser, Elizabeth C.
%A Piper, Christopher J. M.
%A Matei, Diana E.
%A Blair, Paul A.
%A Rendeiro, André F.
%A Orford, Michael
%A Alber, Dagmar G.
%A Krausgruber, Thomas
%A Catalan, Diego
%A Klein, Nigel
%A Manson, Jessica J.
%A Drozdov, Ignat
%A Bock, Christoph
%A Wedderburn, Lucy R.
%A Eaton, Simon
%A Mauri, Claudia
%+ External Organizations
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Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
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%T Microbiota-Derived Metabolites Suppress Arthritis by Amplifying Aryl-Hydrocarbon Receptor Activation in Regulatory B Cells :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-97CD-9
%R 10.1016/j.cmet.2020.03.003
%7 2020
%D 2020
%J Cell Metabolism
%O Cell Metabolism
%V 31
%N 4
%& 837
%P 837 - 851
%Z sequence number: e10
%I Cell Press
%C Cambridge, MA
%@ false
15. Scherer M, Nebel A, Franke A, Walter J, Lengauer T, Bock C, Müller F, List M: Quantitative Comparison of Within-Sample Heterogeneity Scores for DNA Methylation Data. Nucleic Acids Research (London) 2020, 48.
Export
BibTeX
@article{Scherer2020,
TITLE = {Quantitative comparison of within-sample heterogeneity scores for {DNA} methylation data},
AUTHOR = {Scherer, Michael and Nebel, Almut and Franke, Andre and Walter, J{\"o}rn and Lengauer, Thomas and Bock, Christoph and M{\"u}ller, Fabian and List, Markus},
LANGUAGE = {eng},
ISSN = {0305-1048},
DOI = {10.1093/nar/gkaa120},
PUBLISHER = {Oxford University Press},
ADDRESS = {Oxford},
YEAR = {2020},
DATE = {2020},
JOURNAL = {Nucleic Acids Research (London)},
VOLUME = {48},
NUMBER = {8},
EID = {e46},
}
Endnote
%0 Journal Article
%A Scherer, Michael
%A Nebel, Almut
%A Franke, Andre
%A Walter, Jörn
%A Lengauer, Thomas
%A Bock, Christoph
%A Müller, Fabian
%A List, Markus
%+ Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
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Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
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%T Quantitative Comparison of Within-Sample Heterogeneity Scores for DNA Methylation Data :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-95B9-1
%R 10.1093/nar/gkaa120
%2 PMC7192612
%7 2020
%D 2020
%J Nucleic Acids Research (London)
%O Nucleic Acids Res
%V 48
%N 8
%Z sequence number: e46
%I Oxford University Press
%C Oxford
%@ false
16. Scherer M, Nazarov PV, Toth R, Sahay S, Kaoma T, Maurer V, Vedeneev N, Plass C, Lengauer T, Walter J, Lutsik P: Reference-free Deconvolution, Visualization and Interpretation of Complex DNA Methylation Data Using DecompPipeline, MeDeCom and FactorViz. Nature Protocols 2020, 15.
Export
BibTeX
@article{Scherer2020,
TITLE = {Reference-free deconvolution, visualization and interpretation of complex {DNA} methylation data using {DecompPipeline}, {MeDeCom} and {FactorViz}},
AUTHOR = {Scherer, Michael and Nazarov, Petr V. and Toth, Reka and Sahay, Shashwat and Kaoma, Tony and Maurer, Valentin and Vedeneev, Nikita and Plass, Christoph and Lengauer, Thomas and Walter, J{\"o}rn and Lutsik, Pavlo},
LANGUAGE = {eng},
ISSN = {1750-2799},
DOI = {10.1038/s41596-020-0369-6},
PUBLISHER = {Nature Publishing Group},
ADDRESS = {London, UK},
YEAR = {2020},
DATE = {2020},
JOURNAL = {Nature Protocols},
VOLUME = {15},
PAGES = {3240--3263},
}
Endnote
%0 Journal Article
%A Scherer, Michael
%A Nazarov, Petr V.
%A Toth, Reka
%A Sahay, Shashwat
%A Kaoma, Tony
%A Maurer, Valentin
%A Vedeneev, Nikita
%A Plass, Christoph
%A Lengauer, Thomas
%A Walter, Jörn
%A Lutsik, Pavlo
%+ Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
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Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
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%T Reference-free Deconvolution, Visualization and Interpretation of Complex DNA Methylation Data Using DecompPipeline, MeDeCom and FactorViz :
%G eng
%U http://hdl.handle.net/21.11116/0000-0007-2C58-6
%R 10.1038/s41596-020-0369-6
%7 2020
%D 2020
%J Nature Protocols
%O Nat. Protoc.
%V 15
%& 3240
%P 3240 - 3263
%I Nature Publishing Group
%C London, UK
%@ false
17. Schmidt F, Kern F, Schulz MH: Integrative Prediction of Gene Expression with Chromatin Accessibility and Conformation Data. Epigenetics & Chromatin 2020, 13.
Export
BibTeX
@article{Schmidt_Kern_Schulz2020,
TITLE = {Integrative Prediction of Gene Expression with Chromatin Accessibility and Conformation Data},
AUTHOR = {Schmidt, Florian and Kern, Fabian and Schulz, Marcel Holger},
LANGUAGE = {eng},
DOI = {10.1186/s13072-020-0327-0},
PUBLISHER = {BioMed Central},
ADDRESS = {London},
YEAR = {2020},
JOURNAL = {Epigenetics \& Chromatin},
VOLUME = {13},
EID = {4},
}
Endnote
%0 Journal Article
%A Schmidt, Florian
%A Kern, Fabian
%A Schulz, Marcel Holger
%+ External Organizations
External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
%T Integrative Prediction of Gene Expression with Chromatin Accessibility and Conformation Data :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-8E63-B
%R 10.1186/s13072-020-0327-0
%2 PMC7003490
%7 2020
%D 2020
%J Epigenetics & Chromatin
%V 13
%Z sequence number: 4
%I BioMed Central
%C London
18. Schrinner SD, Mari RS, Ebler J, Rautiainen M, Seillier L, Reimer JJ, Usadel B, Marschall T, Klau GW: Haplotype Threading: Accurate Polyploid Phasing from Long Reads. Genome Biology 2020, 21.
Export
BibTeX
@article{Schrinner2020,
TITLE = {Haplotype threading: {A}ccurate polyploid phasing from long reads},
AUTHOR = {Schrinner, Sven D. and Mari, Rebecca Serra and Ebler, Jana and Rautiainen, Mikko and Seillier, Lancelot and Reimer, Julia J. and Usadel, Bjoern and Marschall, Tobias and Klau, Gunnar W.},
LANGUAGE = {eng},
ISSN = {1465-6906},
DOI = {10.1186/s13059-020-02158-1},
PUBLISHER = {BioMed Central Ltd.},
ADDRESS = {London},
YEAR = {2020},
JOURNAL = {Genome Biology},
VOLUME = {21},
NUMBER = {1},
EID = {252},
}
Endnote
%0 Journal Article
%A Schrinner, Sven D.
%A Mari, Rebecca Serra
%A Ebler, Jana
%A Rautiainen, Mikko
%A Seillier, Lancelot
%A Reimer, Julia J.
%A Usadel, Bjoern
%A Marschall, Tobias
%A Klau, Gunnar W.
%+ External Organizations
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Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
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%T Haplotype Threading: Accurate Polyploid Phasing from Long Reads :
%G eng
%U http://hdl.handle.net/21.11116/0000-0007-3619-1
%R 10.1186/s13059-020-02158-1
%7 2020
%D 2020
%J Genome Biology
%V 21
%N 1
%Z sequence number: 252
%I BioMed Central Ltd.
%C London
%@ false
19. Shafin K, Pesout T, Lorig-Roach R, Haukness M, Olsen HE, Bosworth C, Armstrong J, Tigyi K, Maurer N, Koren S, Sedlazeck FJ, Marschall T, Mayes S, Costa V, Zook JM, Liu KJ, Kilburn D, Sorensen M, Munson KM, Vollger MR, Monlong J, Garrison E, Eichler EE, Salama S, Haussler D, Green RE, Akeson M, Phillippy A, Miga KH, Carnevali P, et al.: Nanopore Sequencing and the Shasta Toolkit Enable Efficient de novo Assembly of Eleven Human Genomes. Nature Biotechnology 2020.
Export
BibTeX
@article{Shafin2020,
TITLE = {Nanopore sequencing and the {Shasta} toolkit enable efficient de novo assembly of eleven human genomes},
AUTHOR = {Shafin, Kishwar and Pesout, Trevor and Lorig-Roach, Ryan and Haukness, Marina and Olsen, Hugh E. and Bosworth, Colleen and Armstrong, Joel and Tigyi, Kristof and Maurer, Nicholas and Koren, Sergey and Sedlazeck, Fritz J. and Marschall, Tobias and Mayes, Simon and Costa, Vania and Zook, Justin M. and Liu, Kelvin J. and Kilburn, Duncan and Sorensen, Melanie and Munson, Katy M. and Vollger, Mitchell R. and Monlong, Jean and Garrison, Erik and Eichler, Evan E. and Salama, Sofie and Haussler, David and Green, Richard E. and Akeson, Mark and Phillippy, Adam and Miga, Karen H. and Carnevali, Paolo and Jain, Miten and Paten, Benedict},
LANGUAGE = {eng},
ISSN = {1087-0156},
DOI = {10.1038/s41587-020-0503-6},
PUBLISHER = {Gale Group Inc.},
ADDRESS = {New York},
YEAR = {2020},
JOURNAL = {Nature Biotechnology},
}
Endnote
%0 Journal Article
%A Shafin, Kishwar
%A Pesout, Trevor
%A Lorig-Roach, Ryan
%A Haukness, Marina
%A Olsen, Hugh E.
%A Bosworth, Colleen
%A Armstrong, Joel
%A Tigyi, Kristof
%A Maurer, Nicholas
%A Koren, Sergey
%A Sedlazeck, Fritz J.
%A Marschall, Tobias
%A Mayes, Simon
%A Costa, Vania
%A Zook, Justin M.
%A Liu, Kelvin J.
%A Kilburn, Duncan
%A Sorensen, Melanie
%A Munson, Katy M.
%A Vollger, Mitchell R.
%A Monlong, Jean
%A Garrison, Erik
%A Eichler, Evan E.
%A Salama, Sofie
%A Haussler, David
%A Green, Richard E.
%A Akeson, Mark
%A Phillippy, Adam
%A Miga, Karen H.
%A Carnevali, Paolo
%A Jain, Miten
%A Paten, Benedict
%+ External Organizations
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Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
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%T Nanopore Sequencing and the Shasta Toolkit Enable Efficient de novo Assembly of Eleven Human Genomes :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-8DD2-E
%R 10.1038/s41587-020-0503-6
%7 2020
%D 2020
%J Nature Biotechnology
%I Gale Group Inc.
%C New York
%@ false
20. Shanta O, Noor A, Sebat J, Chaisson MJP, Sanders AD, Zhao X, Malhotra A, Porubsky D, Rausch T, Gardner EJ, Rodriguez OL, Guo L, Collins RL, Fan X, Wen J, Handsaker RE, Fairley S, Kronenberg ZN, Kong X, Hormozdiari F, Lee D, Wenger AM, Hastie AR, Antaki D, Anantharaman T, Audano PA, Brand H, Cantsilieris S, Cao H, Cerveira E, et al.: The Effects of Common Structural Variants on 3D Chromatin Structure. BMC Genomics 2020, 21.
Export
BibTeX
@article{Shanta2020,
TITLE = {The Effects of Common Structural Variants on {3D} Chromatin Structure},
AUTHOR = {Shanta, Omar and Noor, Amina and Sebat, Jonathan and Chaisson, Mark J. P. and Sanders, Ashley D. and Zhao, Xuefang and Malhotra, Ankit and Porubsky, David and Rausch, Tobias and Gardner, Eugene J. and Rodriguez, Oscar L. and Guo, Li and Collins, Ryan L. and Fan, Xian and Wen, Jia and Handsaker, Robert E. and Fairley, Susan and Kronenberg, Zev N. and Kong, Xiangmeng and Hormozdiari, Fereydoun and Lee, Dillon and Wenger, Aaron M. and Hastie, Alex R. and Antaki, Danny and Anantharaman, Thomas and Audano, Peter A. and Brand, Harrison and Cantsilieris, Stuart and Cao, Han and Cerveira, Eliza and Chen, Chong and Chen, Xintong and Chin, Chen-Shan and Chong, Zechen and Chuang, Nelson T. and Lambert, Christine C. and Church, Deanna M. and Clarke, Laura and Farrell, Andrew and Flores, Joey and Galeey, Timur and Gujral, Madhusudan and Guryev, Victor and Heaton, William Haynes and Korlach, Jonas and Kumar, Sushant and Kwon, Jee Young and Lam, Ernest T. and Lee, Jong Eun and Lee, Joyce and Lee, Wan-Ping and Lee, Sau Peng and Li, Shantao and Marks, Patrick and Viaud-Martinez, Karine and Meiers, Sascha and Munson, Katherine M. and Navarro, Fabio C. P. and Nelson, Bradley J. and Nodzak, Conor and Kyriazopoulou-Panagiotopoulou, Sofia and Pang, Andy W. C. and Rosanio, Gabriel and Ryan, Mallory and Stuetz, Adrian and Spierings, Diana C. J. and Ward, Alistair and Welch, Anne Marie E. and Xiao, Ming and Xu, Wei and Zhang, Chengsheng and Zhu, Qihui and Zheng-Bradley, Xiangqun and Lowy, Ernesto and Yakneen, Sergei and McCarroll, Steven and Jun, Goo and Ding, Li and Koh, Chong Lek and Flicek, Paul and Chen, Ken and Gerstein, Mark B. and Kwok, Pui-Yan and Lansdorp, Peter M. and Marth, Gabor T. and Shi, Xinghua and Bashir, Ali and Ye, Kai and Devine, Scott E. and Talkowski, Michael E. and Mills, Ryan E. and Marschall, Tobias and Korbel, Jan O. and Eichler, Evan E. and Lee, Charles and {HGSVC}},
LANGUAGE = {eng},
ISSN = {1471-2164},
DOI = {10.1186/s12864-020-6516-1},
PUBLISHER = {BioMed Central},
YEAR = {2020},
JOURNAL = {BMC Genomics},
VOLUME = {21},
NUMBER = {1},
EID = {95},
}
Endnote
%0 Journal Article
%A Shanta, Omar
%A Noor, Amina
%A Sebat, Jonathan
%A Chaisson, Mark J. P.
%A Sanders, Ashley D.
%A Zhao, Xuefang
%A Malhotra, Ankit
%A Porubsky, David
%A Rausch, Tobias
%A Gardner, Eugene J.
%A Rodriguez, Oscar L.
%A Guo, Li
%A Collins, Ryan L.
%A Fan, Xian
%A Wen, Jia
%A Handsaker, Robert E.
%A Fairley, Susan
%A Kronenberg, Zev N.
%A Kong, Xiangmeng
%A Hormozdiari, Fereydoun
%A Lee, Dillon
%A Wenger, Aaron M.
%A Hastie, Alex R.
%A Antaki, Danny
%A Anantharaman, Thomas
%A Audano, Peter A.
%A Brand, Harrison
%A Cantsilieris, Stuart
%A Cao, Han
%A Cerveira, Eliza
%A Chen, Chong
%A Chen, Xintong
%A Chin, Chen-Shan
%A Chong, Zechen
%A Chuang, Nelson T.
%A Lambert, Christine C.
%A Church, Deanna M.
%A Clarke, Laura
%A Farrell, Andrew
%A Flores, Joey
%A Galeey, Timur
%A Gujral, Madhusudan
%A Guryev, Victor
%A Heaton, William Haynes
%A Korlach, Jonas
%A Kumar, Sushant
%A Kwon, Jee Young
%A Lam, Ernest T.
%A Lee, Jong Eun
%A Lee, Joyce
%A Lee, Wan-Ping
%A Lee, Sau Peng
%A Li, Shantao
%A Marks, Patrick
%A Viaud-Martinez, Karine
%A Meiers, Sascha
%A Munson, Katherine M.
%A Navarro, Fabio C. P.
%A Nelson, Bradley J.
%A Nodzak, Conor
%A Kyriazopoulou-Panagiotopoulou, Sofia
%A Pang, Andy W. C.
%A Rosanio, Gabriel
%A Ryan, Mallory
%A Stuetz, Adrian
%A Spierings, Diana C. J.
%A Ward, Alistair
%A Welch, Anne Marie E.
%A Xiao, Ming
%A Xu, Wei
%A Zhang, Chengsheng
%A Zhu, Qihui
%A Zheng-Bradley, Xiangqun
%A Lowy, Ernesto
%A Yakneen, Sergei
%A McCarroll, Steven
%A Jun, Goo
%A Ding, Li
%A Koh, Chong Lek
%A Flicek, Paul
%A Chen, Ken
%A Gerstein, Mark B.
%A Kwok, Pui-Yan
%A Lansdorp, Peter M.
%A Marth, Gabor T.
%A Shi, Xinghua
%A Bashir, Ali
%A Ye, Kai
%A Devine, Scott E.
%A Talkowski, Michael E.
%A Mills, Ryan E.
%A Marschall, Tobias
%A Korbel, Jan O.
%A Eichler, Evan E.
%A Lee, Charles
%A HGSVC,
%+ External Organizations
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Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
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Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
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%T The Effects of Common Structural Variants on 3D Chromatin Structure :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-8E73-9
%R 10.1186/s12864-020-6516-1
%7 2020
%D 2020
%J BMC Genomics
%V 21
%N 1
%Z sequence number: 95
%I BioMed Central
%@ false
21. Srikakulam SK, Bastys T, Kalinina OV: A Shift of Dynamic Equilibrium between the KIT Active and Inactive States Causes Drug Resistance. Proteins: Structure, Function, and Bioinformatics 2020.
Export
BibTeX
@article{Srikakulam2020,
TITLE = {A shift of dynamic equilibrium between the {KIT} active and inactive states causes drug resistance},
AUTHOR = {Srikakulam, Sanjay K. and Bastys, Tomas and Kalinina, Olga V.},
LANGUAGE = {eng},
ISSN = {0887-3585},
DOI = {10.1002/prot.25963},
PUBLISHER = {John Wiley \& Sons},
ADDRESS = {New York, NY},
YEAR = {2020},
JOURNAL = {Proteins: Structure, Function, and Bioinformatics},
}
Endnote
%0 Journal Article
%A Srikakulam, Sanjay K.
%A Bastys, Tomas
%A Kalinina, Olga V.
%+ External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
%T A Shift of Dynamic Equilibrium between the KIT Active and Inactive States Causes Drug Resistance :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-B96C-1
%R 10.1002/prot.25963
%7 2020
%D 2020
%J Proteins: Structure, Function, and Bioinformatics
%I John Wiley & Sons
%C New York, NY
%@ false
22. Szymczak S, Dose J, Torres GG, Heinsen F-A, Venkatesh G, Datlinger P, Nygaard M, Mengel-From J, Flachsbart F, Klapper W, Christensen K, Lieb W, Schreiber S, Häsler R, Bock C, Franke A, Nebel A: DNA Methylation QTL Analysis Identifies New Regulators of Human Longevity. Human Molecular Genetics 2020, 29.
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BibTeX
@article{Szymczak2020,
TITLE = {{DNA} methylation {QTL} analysis identifies new regulators of human longevity},
AUTHOR = {Szymczak, Silke and Dose, Janina and Torres, Guillermo G. and Heinsen, Femke-Anouska and Venkatesh, Geetha and Datlinger, Paul and Nygaard, Marianne and Mengel-From, Jonas and Flachsbart, Friederike and Klapper, Wolfram and Christensen, Kaare and Lieb, Wolfgang and Schreiber, Stefan and H{\"a}sler, Robert and Bock, Christoph and Franke, Andre and Nebel, Almut},
LANGUAGE = {eng},
ISSN = {0964-6906},
DOI = {10.1093/hmg/ddaa033},
PUBLISHER = {IRL Press},
ADDRESS = {Oxford, England},
YEAR = {2020},
DATE = {2020},
JOURNAL = {Human Molecular Genetics},
VOLUME = {29},
NUMBER = {7},
PAGES = {1154--1167},
}
Endnote
%0 Journal Article
%A Szymczak, Silke
%A Dose, Janina
%A Torres, Guillermo G.
%A Heinsen, Femke-Anouska
%A Venkatesh, Geetha
%A Datlinger, Paul
%A Nygaard, Marianne
%A Mengel-From, Jonas
%A Flachsbart, Friederike
%A Klapper, Wolfram
%A Christensen, Kaare
%A Lieb, Wolfgang
%A Schreiber, Stefan
%A Häsler, Robert
%A Bock, Christoph
%A Franke, Andre
%A Nebel, Almut
%+ External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
External Organizations
%T DNA Methylation QTL Analysis Identifies New Regulators of Human Longevity :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-A277-D
%R 10.1093/hmg/ddaa033
%2 PMC7206852
%7 2020
%D 2020
%J Human Molecular Genetics
%V 29
%N 7
%& 1154
%P 1154 - 1167
%I IRL Press
%C Oxford, England
%@ false
23. Ulz P, Perakis S, Zhou Q, Moser T, Belic J, Lazzeri I, Woelfler A, Zebisch A, Gerger A, Pristauz G, Petru E, White B, Roberts CES, St Johns J, Schimek MG, Geigl JB, Bauernhofer T, Sill H, Bock C, Heitzer E, Speicher MR: Publisher Correction: Inference of Transcription Factor Binding from Cell-free DNA Enables Tumor Subtype Prediction and Early Detection. Nature Communications 2020, 11.
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BibTeX
@article{Ulz_2020,
TITLE = {Publisher Correction: {Inference} of Transcription Factor Binding from Cell-free {DNA} Enables Tumor Subtype Prediction and Early Detection},
AUTHOR = {Ulz, Peter and Perakis, Samantha and Zhou, Qing and Moser, Tina and Belic, Jelena and Lazzeri, Isaac and Woelfler, Albert and Zebisch, Armin and Gerger, Armin and Pristauz, Gunda and Petru, Edgar and White, Brandon and Roberts, Charles E. S. and St Johns, John and Schimek, Michael G. and Geigl, Jochen B. and Bauernhofer, Thomas and Sill, Heinz and Bock, Christoph and Heitzer, Ellen and Speicher, Michael R.},
LANGUAGE = {eng},
ISSN = {2041-1723},
DOI = {10.1038/s41467-020-15799-4},
PUBLISHER = {Nature Publishing Group},
ADDRESS = {London},
YEAR = {2020},
DATE = {2020},
JOURNAL = {Nature Communications},
VOLUME = {11},
EID = {1965},
}
Endnote
%0 Journal Article
%A Ulz, Peter
%A Perakis, Samantha
%A Zhou, Qing
%A Moser, Tina
%A Belic, Jelena
%A Lazzeri, Isaac
%A Woelfler, Albert
%A Zebisch, Armin
%A Gerger, Armin
%A Pristauz, Gunda
%A Petru, Edgar
%A White, Brandon
%A Roberts, Charles E. S.
%A St Johns, John
%A Schimek, Michael G.
%A Geigl, Jochen B.
%A Bauernhofer, Thomas
%A Sill, Heinz
%A Bock, Christoph
%A Heitzer, Ellen
%A Speicher, Michael R.
%+ External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
External Organizations
Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society
External Organizations
External Organizations
%T Publisher Correction: Inference of Transcription Factor Binding from Cell-free DNA Enables Tumor Subtype Prediction and Early Detection :
%G eng
%U http://hdl.handle.net/21.11116/0000-0006-99C3-1
%R 10.1038/s41467-020-15799-4
%2 PMC7170910
%7 2020
%D 2020
%J Nature Communications
%O Nat. Commun.
%V 11
%Z sequence number: 1965
%I Nature Publishing Group
%C London
%@ false